Abstract Glioblastoma (GBM) is the most aggressive primary brain malignancy in adults, yet predominant late-stage diagnosis has hindered comprehensive understanding of the precancer stage of GBM. In particular, the tumor microenvironment (TME) —a crucial component of GBM biology—and how it co-evolves with emerging GBM during the precancer stage remain poorly understood. To address this gap, we applied scRNA-seq in a spontaneous GBM mouse model to longitudinally track mutant and microenvironmental cell populations throughout the evolutionary trajectory from precancer to cancer stages. We identified a cellular transition from oligodendrocyte progenitor (OPC) -like cells to mesenchymal (MES) -like cells as a principal event associated with precancer-to-cancer evolution. Notably, we discovered a previously unrecognized microglial population, termed Precancer-Associated Microglia (PAM), displaying enhanced phagocytic activity that distinguished them from tumor-associated microglia/macrophages (TAM). PAM depletion significantly accelerated GBM growth, underscoring the tumor-suppressive role of PAM during GBM evolution. Moreover, PAM preferentially engulfed MES-like cells while sparing OPC-like cells and their normally differentiated progeny, markedly constraining intratumoral heterogeneity—a defining hallmark of advanced GBM. These observations were validated in human scRNA-seq datasets from subventricular zone (SVZ) -tumor paired samples, revealing human PAM populations with pronounced phagocytic features distinct from TAM. Together, these findings establish PAM as a critical intrinsic host defense mechanism against early brain tumorigenesis through selective phagocytic elimination. Citation Format: Keon Woo Kim, Hyeon Cheol Kim, Hyun Jung Kim, Jung Won Park, Minkyoung Choi, Won Suk Chung, Heung Kyu Lee, Jeong Ho Lee. Precancer-Associated Microglia Restrain Glioblastoma Evolution Through Phagocytic Clearance abstract. In: Proceedings of the AACR Special Conference in Cancer Research: Brain Cancer; 2026 Mar 23-25; Philadelphia, PA. Philadelphia (PA): AACR; Cancer Res 2026;86 (6Suppl): Abstract nr PR008.
Kim et al. (Mon,) studied this question.