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In version 3, Core Hunter has been updated to include two new core subset selection metrics that construct cores for representativeness or diversity, with improved performance. It combines and outperforms the strengths of other methods, as it (simultaneously) optimizes a variety of metrics. In addition, CH3 is an improvement over CH2, with the option to use genetic marker data or phenotypic traits, or both, and improved speed. Core Hunter 3 is freely available on http://www.corehunter.org .
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Herman De Beukelaer
University College Ghent
Guy Davenport
Plant & Food Research
Veerle Fack
Ghent University
BMC Bioinformatics
SHILAP Revista de lepidopterología
Ghent University
Plant & Food Research
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Beukelaer et al. (Thu,) studied this question.
synapsesocial.com/papers/69da22e20f778bd2e46843be — DOI: https://doi.org/10.1186/s12859-018-2209-z