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April 26, 2026Artificial Cells Nanomedicine and Biotechnology0 citationsOpen Access

Identification and multi-layered experimental validation of feature genes related to butyrate metabolism and oxidative stress in sepsis

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QFQinglu FanSichuan UniversityRLRenwei LuoWuhan UniversityLQLingxia QinWuhan University

Key Points

  • This study aims to clarify the relationship between butyrate metabolism, oxidative stress, and sepsis to identify potential therapeutic targets.
  • Analyzed sepsis-related datasets to identify 876 differential expression genes (DEGs)
  • Utilized machine learning algorithms to pinpoint 3 feature genes: ALDH1A1, CYP1B1, GADD45A
  • Conducted immune infiltration analysis and validated findings using cellular experiments and clinical samples.
  • Identified 3 feature genes (ALDH1A1, CYP1B1, GADD45A) with significant diagnostic potential for sepsis
  • CIBERSORT analysis revealed significant correlations with immune cell proportions, particularly monocytes
  • Validation of expression levels confirmed the role of monocytes in mediating the effects of feature genes on sepsis.

Abstract

The mechanisms underlying sepsis remain poorly understood and specific therapeutic options remain lacking. Accumulating evidence suggests that butyrate metabolism and oxidative stress (OS) are involved in the pathogenesis of sepsis. This study aims to elucidate molecular characteristics of butyrate metabolism and OS-related genes in sepsis and find potential therapeutic targets. Using sepsis-related datasets, 876 differential expression genes (DEGs) were screened and intersected with butyrate metabolism and OS-related genes to yield 8 differentially expressed butyrate metabolism and OS-related genes (DEBORGs). Machine learning algorithms finally identified 3 feature genes (ALDH1A1, CYP1B1, and GADD45A) with favourable diagnostic values for sepsis. CIBERSORT immune infiltration analysis demonstrated strong associations between feature genes and the infiltration proportions of various immune cell types, such as monocyte, macrophage, and neutrophil. Cellular experiment and prospectively collected clinical samples were utilized to validate the expression levels and diagnostic efficacy of feature genes. The scRNA-seq analysis indicated that monocyte plays a crucial role in mediating the effect of feature genes on sepsis. This study elucidates that ALDH1A1, CYP1B1, and GADD45A are feature genes linked to butyrate metabolism and OS in sepsis, with monocytes being the primary cells involved, providing novel insights into the sepsis pathogenesis and potential therapeutic targets.

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Cite This Study

Fan et al. (2026) studied this question.

synapsesocial.com/papers/69edac2e4a46254e215b404ahttps://doi.org/10.1080/21691401.2026.2658990
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