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Inferring spatially transient gene expression pattern from spatial transcriptomic studies | Synapse

October 21, 2020Open Access

Inferring spatially transient gene expression pattern from spatial transcriptomic studies

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Abstract Spatial transcriptomic is a technology to provide deep transcriptomic profiling by preserving the spatial organization. Here, we present a framework for SPAtial Transcriptomic Analysis (SPATA, https://themilolab.github.io/SPATA ), to provide a comprehensive characterization of spatially resolved gene expression, regional adaptation of transcriptional programs and transient dynamics along spatial trajectories.

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Kueckelhaus et al. (Wed,) studied this question.

synapsesocial.com/papers/6a152d0e37103a43379f56d5 https://doi.org/https://doi.org/10.1101/2020.10.20.346544

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