Logomaker: beautiful sequence logos in Python

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Abstract

Logomaker can be installed using the pip package manager and is compatible with both Python 2.7 and Python 3.6. Documentation is provided at http://logomaker.readthedocs.io; source code is available at http://github.com/jbkinney/logomaker.

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Tareen et al. (Fri,) studied this question.

synapsesocial.com/papers/69b87b588fdbe765d82fbce0 — DOI: https://doi.org/10.1093/bioinformatics/btz921

Authors

Ammar Tareen

Regeneron (United States)

Justin B. Kinney

Cold Spring Harbor Laboratory

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Bioinformatics

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Cold Spring Harbor Laboratory

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Also consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

Quantitative Activity Profile and Context Dependence of All Human 5′ Splice Sites· 2018 · 128 citations
Predicting Splicing from Primary Sequence with Deep Learning· 2019 · 2,881 citations
Sequence logos: a new way to display consensus sequences· 1990 · 3,459 citations
MEME SUITE: tools for motif discovery and searching· 2009 · 11,437 citations
The iceLogo web server and SOAP service for determining protein consensus sequences· 2015 · 67 citations

Also consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

Quantitative Activity Profile and Context Dependence of All Human 5′ Splice Sites· 2018 · 128 citations
Predicting Splicing from Primary Sequence with Deep Learning· 2019 · 2,881 citations
Sequence logos: a new way to display consensus sequences· 1990 · 3,459 citations
MEME SUITE: tools for motif discovery and searching· 2009 · 11,437 citations
The iceLogo web server and SOAP service for determining protein consensus sequences· 2015 · 67 citations

Logomaker: beautiful sequence logos in Python

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Abstract

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Cite this study

Authors

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Institutions

References and Citations

Citation Network

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Discussion

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Also consider