missMethyl: an R package for analyzing data from Illumina’s HumanMethylation450 platform

Also Consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

1. 1Gene ontology analysis for RNA-seq: accounting for selection bias2010 · 7,834 citations
2. 2SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips2012 · 893 citations
3. 3Increased methylation variation in epigenetic domains across cancer types2011 · 1,094 citations
4. 4DiffVar: a new method for detecting differential variability with application to methylation in cancer and aging2014 · 116 citations
5. 5Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data2015 · 104 citations