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April 1, 201367 citations

Top-k string similarity search with edit-distance constraints

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DDDong DengGLGuoliang LiJFJianhua Feng

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Abstract

String similarity search is a fundamental operation in many areas, such as data cleaning, information retrieval, and bioinformatics. In this paper we study the problem of top-k string similarity search with edit-distance constraints, which, given a collection of strings and a query string, returns the top-k strings with the smallest edit distances to the query string. Existing methods usually try different edit-distance thresholds and select an appropriate threshold to find top-k answers. However it is rather expensive to select an appropriate threshold. To address this problem, we propose a progressive framework by improving the traditional dynamic-programming algorithm to compute edit distance. We prune unnecessary entries in the dynamic-programming matrix and only compute those pivotal entries. We extend our techniques to support top-k similarity search. We develop a range-based method by grouping the pivotal entries to avoid duplicated computations. Experimental results show that our method achieves high performance, and significantly outperforms state-of-the-art approaches on real-world datasets.

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Cite This Study

Deng et al. (2013) studied this question.

synapsesocial.com/papers/6a172656b082e78ad77be944https://doi.org/10.1109/icde.2013.6544886
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