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June 1, 2026Scientific Reports0 citationsOpen Access

An explainable spatio-temporal deep learning framework for crop yield prediction and recommendation

NSNifasath Piyar SBSBaulkani S

Key Points

  • This study aims to develop an AI-driven framework for accurate crop yield prediction and optimal crop recommendation.
  • Integrated data preprocessing techniques including median imputation and Z-score outlier detection.
  • Employed hybrid feature selection methods to reduce redundancy and enhance model input quality.
  • Utilized an attention-enhanced hybrid kernel Extreme Learning Machine and a Spatio-Temporal Explainable Group-Enhanced Transformer Network.
  • Achieved a root mean square error (RMSE) of 281.6 and R² of 0.94 for crop yield prediction.
  • Attained 98.4% accuracy with a 0.991 ROC-AUC for crop recommendation, indicating high effectiveness.

Abstract

Agriculture plays a critical role in ensuring global food security, yet crop yield variability driven by climate change, soil heterogeneity, and environmental fluctuations poses persistent challenges. Accurate yield forecasting and intelligent crop recommendation are essential for sustainable and efficient farm management. This study proposes a novel AI-driven framework for precise crop yield prediction and data-driven crop selection. The framework integrates systematic data preprocessing, hybrid feature selection, deep learning, and attention-based modeling to capture complex nonlinear relationships within agricultural datasets. Raw data, including soil properties, topography, climatic variables, and historical yield records, are processed using median-based imputation, normalization, and Z-score outlier detection to enhance reliability. A multi-stage hybrid feature selection approach combining Minimum Redundancy Maximum Weight, Sequential Forward Subset Selection, and Recursive Fisher Score identifies the most informative features while reducing redundancy. Yield prediction is performed using an attention-enhanced hybrid kernel Extreme Learning Machine (ELM). Crop recommendation is achieved through a Spatio-Temporal Explainable Group-Enhanced Transformer Network (STX-GTNET) optimized with the PantheraCobra metaheuristic. Model interpretability is ensured using Grad-CAM and Integrated Gradients. Experimental results demonstrate strong performance, achieving an RMSE of 281.6 and R² of 0.94 for yield prediction, and 98.4% accuracy with a 0.991 ROC-AUC for crop recommendation.

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Cite This Study

S et al. (2026) studied this question.

synapsesocial.com/papers/6a1d21e502fbce9130637bbehttps://doi.org/10.1038/s41598-026-54439-7
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