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August 26, 2026BMC Cancer0 citationsOpen Access

A large-scale multi-center analysis reveals that HNRNPA2B1 variants increase neuroblastoma risk in Chinese children

MZMengzhen ZhangYLYong LianLLLi Li

Key Points

  • To evaluate the epidemiological association between HNRNPA2B1 genetic polymorphisms and neuroblastoma susceptibility, clinical phenotypes, and prognosis.
  • Conducted a multi-center case-control study of 1,300 pediatric neuroblastoma cases and 2,207 cancer-free controls across 9 Chinese hospitals.
  • Genotyped HNRNPA2B1 variants (rs17153396 T>A and rs4273 C>T) and analyzed associations via multivariable logistic regression, stratification, and false-positive report probability tests.
  • Assessed gene expression, clinical outcomes, and protein-protein interaction networks using public transcriptome datasets (GSE45547 and GSE16476).
  • The rs4273 C>T polymorphism significantly increased overall neuroblastoma risk (adjusted OR = 1.28, 95% CI = 1.03–1.57, P = 0.023), with an allelic cumulative effect (adjusted OR = 1.25, 95% CI = 1.02–1.53, P = 0.029).
  • Genetic susceptibility for rs4273 was most pronounced in female patients, infants (≤ 18 months), and early-stage cases (INSS stages I, II, and 4s).
  • Transcriptome profiling demonstrated that HNRNPA2B1 upregulation strongly correlates with advanced INSS stage, MYCN amplification, and poor survival, acting as an oncogenic hub protein.

Abstract

Neuroblastoma has significant clinical heterogeneity, more precise genetic biomarkers are needed for early risk stratification. Although m 6 A modification has been reported to affect tumor development, the epidemiological impact of HNRNPA2B1 polymorphisms on neuroblastoma susceptibility remains to be determined. We recruited 1300 children with neuroblastoma and 2207 cancer-free controls across 9 Chinese hospitals to investigate the genetic contribution of HNRNPA2B1 variants (rs17153396 T > A and rs4273 C > T). Genetic associations were assessed through logistic regression and stratified risk analysis, and the robustness of the results was tested by false-positive report probability (FPRP) assessments. We integrated how HNRNPA2B1 affects survival and its interactome network by combining data from two public sets (GSE45547 and GSE16476) with protein‒protein interaction (PPI) network analysis. The rs4273 C > T polymorphism increased neuroblastoma risk adjusted odds ratio (OR) = 1.28, 95% confidence interval (CI) = 1.03–1.57, P = 0.023, and showed cumulative allelic effects (adjusted OR = 1.25, 95% CI = 1.02–1.53, P = 0.029). This genetic susceptibility was mainly manifested in female patients, infants (≤ 18 months), and early-stage patients International Neuroblastoma Staging System (INSS) I + II+4s. Transcriptome analyses revealed that upregulation of HNRNPA2B1 was correlated with advanced INSS stage, MYCN amplification, and poor prognosis, and its corresponding protein functioning as a critical hub in oncogenic PPI network. The rs4273 variant emerges as a novel genetic determinant of neuroblastoma risk. The association between HNRNPA2B1 abnormalities and aggressive clinical phenotypes suggest that HNRNPA2B1 is both a potential risk indicator and a promising target for neuroblastoma treatment.

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Cite This Study

Zhang et al. (2026) studied this question.

synapsesocial.com/papers/6a8e9af2451774b83f3b36c6https://doi.org/10.1186/s12885-026-16849-8
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