December 1, 2020Open Access

SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data

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Abstract

We present SoupX, a tool for removing ambient RNA contamination from droplet-based single-cell RNA sequencing experiments. This tool has broad applicability, and its application can improve the biological utility of existing and future datasets.

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Young et al. (Tue,) studied this question.

synapsesocial.com/papers/69d708d08dca315383ed97f4 https://doi.org/https://doi.org/10.1093/gigascience/giaa151

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