Molecular docking analysis of TRPC6 missense variants strongly correlated with patch-clamp electrophysiology, demonstrating an 82% concordance rate in predicting functional impact.
Computational molecular docking provides a rapid and reliable method for predicting the functional impact of TRPC6 missense variants, which may help assess risk for doxorubicin-induced cardiomyopathy.
Gain-of-function mutations in the transient receptor potential 6 (TRPC6) channel have been identified as risk factors for doxorubicin (DOX)-induced cardiomyopathy and heart failure.Functional characterization of TRPC6 missense variants is therefore important for cancer patients undergoing anthracycline therapy; however, conventional electrophysiological methods are laborintensive and time-consuming.Here, we evaluated the functional responses of TRPC6 missense variants to 1-oleoyl-2-acetyl-sn-glycerol (OAG), a TRPC6 agonist, using molecular docking and patch-clamp recording.For the wild-type (WT) TRPC6 structure (PDB ID: 6UZ8), OAG exhibited a binding energy of -4.49 kcal/mol and a dissociation constant (Kd) of 0.511 mM.Twenty missense variants were identified from cancer patients, of which fifteen had resolvable structures.Among these, nine variants showed increased Kd values and six showed decreased Kd values relative to WT. Patch-clamp recordings demonstrated that WT and mutant channels were inactive at baseline but were activated by 50 M OAG, except for two loss-of-function variants.Notably, all three variants identified in patients with heart failure exhibited loss-of-function properties in both electrophysiological and in silico analyses.Furthermore, 24-hour treatment with 0.5 M DOX significantly potentiated OAG-induced channel activation in WT and gain-offunction variants, but not in loss-of-function variants.Importantly, our molecular docking and electrophysiological results were strongly correlated, with an 82% concordance rate, exceeding AlphaMissense predictions.These findings indicate that our computational analysis provides a rapid and reliable method for predicting the functional impact of TRPC6 missense variants, which may aid clinical decision-making in cancer patients receiving chemotherapy.
Wu et al. (Fri,) conducted a other in Doxorubicin-induced cardiomyopathy and heart failure in cancer patients (n=20). Molecular docking analysis vs. Patch clamp electrophysiology was evaluated on Concordance rate between molecular docking and electrophysiological results. Molecular docking analysis of TRPC6 missense variants strongly correlated with patch-clamp electrophysiology, demonstrating an 82% concordance rate in predicting functional impact.