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May 28, 2026European Journal of Clinical Microbiology & Infectious Diseases0 citationsOpen Access

Optimization of stool culture protocol in a tertiary hospital in Bangkok, Thailand: a prospective cohort study

NONanapol OngworawutUKUsa KijsinthopchaiSYSamaporn Yongyod

Key Points

  • To determine the prevalence of bacterial enteric pathogens and optimize stool culture protocols in a Thai tertiary hospital.
  • Evaluated 597 diarrheal stool samples for specific enteric pathogens using standard and additional diagnostic methods.
  • Applied Bayesian latent class analysis to estimate S. enterica method sensitivities.
  • Conducted analytical limit of detection studies for S. enterica, Campylobacter spp., and Yersinia spp. using spiked stool matrices.
  • 12.7% of samples contained enteric pathogens, with S. enterica at 10.4% and Campylobacter spp. at 2.2%.
  • Bayesian analysis found Gram-negative broth sensitivity at 97.4% and modified semisolid Rappaport Vassiliadis agar at 89.4%.
  • CIN agar for Yersinia spp. was deemed cost-inefficient, while Campylobacter selective agar outperformed membrane filtration.

Abstract

Abstract Purpose Stool culture protocols are resource-intensive, and the necessity of specific selective media is frequently debated. We aimed to determine the prevalence of bacterial enteric pathogens in a Thai tertiary hospital and optimize routine culture protocols by evaluating various diagnostic methods. Methods We evaluated 597 diarrheal stool samples using standard protocols for Salmonella enterica , Shigella spp., Vibrio spp., Aeromonas spp., and Plesiomonas shigelloides . Additional protocols evaluated the detection of Campylobacter spp. (selective medium and membrane filtration) and enteric Yersinia spp. (cefsulodin-irgasan-novobiocin CIN agar). To estimate S. enterica method sensitivities, we applied Bayesian latent class analysis (LCA). Additionally, analytical limit of detection (LOD) studies using spiked stool matrices were performed for S. enterica , Campylobacter spp., and Yersinia spp. Results Enteric pathogens were isolated from 12.7% of the samples, predominantly S. enterica (10.4%) and Campylobacter spp. (2.2%); no Yersinia spp. were detected. For S. enterica , LCA estimated sensitivities of Gram-negative (GN) broth (97.4%) and modified semisolid Rappaport Vassiliadis (MSRV) agar (89.4%), significantly outperforming other solid media. Campylobacter membrane filtration and selective agar showed near-perfect clinical agreement (99.8%); however, spiked LOD testing revealed that selective agar was 10 4 -fold more analytically sensitive. For Yersinia spp., both CIN and MAC agars achieved a LOD of 10 4 CFU/ml in fresh stool. Conclusion GN broth and MSRV agar are needed to maximize S. enterica yield. Routine CIN agar for Yersinia spp. is not cost-efficient, and Campylobacter selective agar should replace membrane filtration to prevent false-negative reporting in low-shedding patients.

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Cite This Study

Ongworawut et al. (2026) studied this question.

synapsesocial.com/papers/6a17dcf93fad632b0f9d9a21https://doi.org/10.1007/s10096-026-05554-w
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