Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor

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Abstract

Censor and RepbaseSubmitter are available as both web-based services and downloadable versions. They can be found at http://www.girinst.org/repbase/submission.html (RepbaseSubmitter) and http://www.girinst.org/censor/index.php (Censor).

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Authors

Oleksiy Kohany

Andrew J. Gentles

Stanford University

Lukasz Hankus

Journals

BMC Bioinformatics

SHILAP Revista de lepidopterología

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Stanford University

Genetic Information Research Institute

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Kohany et al. (Wed,) studied this question.

synapsesocial.com/papers/69d71e97ef370a38abf50a88 — DOI: https://doi.org/10.1186/1471-2105-7-474

Also consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

Identification of common molecular subsequences· 1981 · 10,075 citations
Evolutionary models for insertions and deletions in a probabilistic modeling framework· 2005 · 69 citations
<i>MaskerAid</i> : a performance enhancement to RepeatMasker· 2000 · 282 citations
Empirical determination of effective gap penalties for sequence comparison· 2002 · 60 citations
Censor—a program for identification and elimination of repetitive elements from DNA sequences· 1996 · 415 citations

Also consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

Identification of common molecular subsequences· 1981 · 10,075 citations
Evolutionary models for insertions and deletions in a probabilistic modeling framework· 2005 · 69 citations
<i>MaskerAid</i> : a performance enhancement to RepeatMasker· 2000 · 282 citations
Empirical determination of effective gap penalties for sequence comparison· 2002 · 60 citations
Censor—a program for identification and elimination of repetitive elements from DNA sequences· 1996 · 415 citations

Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor

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Abstract

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Discussion

Cite this study

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