August 20, 2012

Snakemake—a scalable bioinformatics workflow engine

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Abstract

johannes.koester@uni-due.de.

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Köster et al. (Mon,) studied this question.

synapsesocial.com/papers/69d6b4cefca0359822aa81b0 — DOI: https://doi.org/10.1093/bioinformatics/bts480

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An open graph visualization system and its applications to software engineering· 2000 · 1,105 citations
GNU make : a program for directing recompilation· 1996 · 45 citations

Authors

Johannes Köster

Essen University Hospital

Sven Rahmann

Max Planck Institute for Informatics

Journals

Bioinformatics

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Institutions

University of Duisburg-Essen

References and Citations

Connected Papers

Building similarity graph...

Analyzing shared references across papers

Discussion

Also consider

Synapse has enriched 5 closely related papers on similar clinical questions. Consider them for comparative context:

Bpipe: a tool for running and managing bioinformatics pipelines· 2012 · 181 citations
Pwrake· 2010 · 26 citations
The Sequence Alignment/Map format and SAMtools· 2009 · 67,266 citations
An open graph visualization system and its applications to software engineering· 2000 · 1,105 citations
GNU make : a program for directing recompilation· 1996 · 45 citations

Snakemake—a scalable bioinformatics workflow engine

Key Points

Abstract

Citation Network

Connected Papers

Discussion

Cite this study

Also consider

Authors

Journals

Actions

Institutions

References and Citations

Citation Network

Connected Papers

Discussion

Also consider