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pegas is distributed through the Comprehensive R Archive Network (CRAN): http://cran.r-project.org/web/packages/pegas/index.html. Further information may be found at: http://ape.mpl.ird.fr/pegas/.
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Emmanuel Paradis
Bioinformatics
Institut de Recherche pour le Développement
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Emmanuel Paradis (Sat,) studied this question.
www.synapsesocial.com/papers/69d83306a2a48916bbbef514 — DOI: https://doi.org/10.1093/bioinformatics/btp696