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The new BLAST command-line applications, compared to the current BLAST tools, demonstrate substantial speed improvements for long queries as well as chromosome length database sequences. We have also improved the user interface of the command-line applications.
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Christiam Camacho
George Coulouris
Vahram Avagyan
BMC Bioinformatics
SHILAP Revista de lepidopterología
National Institutes of Health
National Center for Biotechnology Information
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Camacho et al. (Tue,) studied this question.
www.synapsesocial.com/papers/69d6a92be328128020aa7eaf — DOI: https://doi.org/10.1186/1471-2105-10-421