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These results show that a CGP assay targeting ~1.1 Mb of coding genome can accurately assess TMB compared with sequencing the whole exome. Using this method, we find that many disease types have a substantial portion of patients with high TMB who might benefit from immunotherapy. Finally, we identify novel, recurrent promoter mutations in PMS2, which may be another example of regulatory mutations contributing to tumorigenesis.
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Zachary R. Chalmers
Caitlin Connelly
David Fabrizio
Genome Medicine
SHILAP Revista de lepidopterología
Harvard University
Dana-Farber Cancer Institute
Broad Institute
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Chalmers et al. (Thu,) studied this question.
www.synapsesocial.com/papers/69d7cddd05ee2ba81dbee181 — DOI: https://doi.org/10.1186/s13073-017-0424-2