An advanced data warehouse algorithm integrating clinical text and echocardiography data improved the F1 score for detecting heart failure from 65% to 86% compared to relying solely on ICD codes.
Observational (n=71,625)
No
Heart failure (n=71,625)
Advanced data warehouse algorithm (AF1) vs ICD-based diagnosis (MICD)
F1 score for detecting heart failure compared to a physician-based reference standard
Absolute Event Rate: 86% vs 65%
BACKGROUND: Heart failure is the predominant cause of hospitalization and amongst the leading causes of death in Germany. However, accurate estimates of prevalence and incidence are lacking. Reported figures originating from different information sources are compromised by factors like economic reasons or documentation quality. METHODS: We implemented a clinical data warehouse that integrates various information sources (structured parameters, plain text, data extracted by natural language processing) and enables reliable approximations to the real number of heart failure patients. Performance of ICD-based diagnosis in detecting heart failure was compared across the years 2000-2015 with (a) advanced definitions based on algorithms that integrate various sources of the hospital information system, and (b) a physician-based reference standard. RESULTS: Applying these methods for detecting heart failure in inpatients revealed that relying on ICD codes resulted in a marked underestimation of the true prevalence of heart failure, ranging from 44% in the validation dataset to 55% (single year) and 31% (all years) in the overall analysis. Percentages changed over the years, indicating secular changes in coding practice and efficiency. Performance was markedly improved using search and permutation algorithms from the initial expert-specified query (F1 score of 81%) to the computer-optimized query (F1 score of 86%) or, alternatively, optimizing precision or sensitivity depending on the search objective. CONCLUSIONS: Estimating prevalence of heart failure using ICD codes as the sole data source yielded unreliable results. Diagnostic accuracy was markedly improved using dedicated search algorithms. Our approach may be transferred to other hospital information systems.
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Mathias Kaspar
University of Augsburg
Georg Fette
Universitätsklinikum Würzburg
Gülmisal Güder
Universitätsklinikum Würzburg
Clinical Research in Cardiology
University of Würzburg
Universitätsklinikum Würzburg
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Kaspar et al. (Tue,) conducted a observational in Heart failure (n=71,625). Advanced data warehouse algorithm (AF1) vs. ICD-based diagnosis (MICD) was evaluated on F1 score for detecting heart failure compared to a physician-based reference standard. An advanced data warehouse algorithm integrating clinical text and echocardiography data improved the F1 score for detecting heart failure from 65% to 86% compared to relying solely on ICD codes.
synapsesocial.com/papers/6a08f464a2bc65e38873a819 — DOI: https://doi.org/10.1007/s00392-018-1245-z