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The Bayesian Evolutionary Analysis by Sampling Trees (BEAST) software package has become a primary tool for Bayesian phylogenetic and phylodynamic inference from genetic sequence data. BEAST unifies molecular phylogenetic reconstruction with complex discrete and continuous trait evolution, divergence-time dating, and coalescent demographic models in an efficient statistical inference engine using Markov chain Monte Carlo integration. A convenient, cross-platform, graphical user interface allows the flexible construction of complex evolutionary analyses.
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Marc A. Suchard
United States Department of Veterans Affairs
Philippe Lemey
Université Paris-Sud
Guy Baele
Rega Institute for Medical Research
Virus Evolution
University of California, Los Angeles
University of Maryland, College Park
University of Edinburgh
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Suchard et al. (Mon,) studied this question.
synapsesocial.com/papers/69d6cab58dca315383ed8f6e — DOI: https://doi.org/10.1093/ve/vey016