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miRWalk is an open-source platform providing an intuitive interface that generates predicted and validated miRNA-binding sites of known genes of human, mouse, rat, dog and cow. The core of miRWalk is the miRNA target site prediction with the random-forest-based approach software TarPmiR searching the complete transcript sequence including the 5'-UTR, CDS and 3'-UTR. Moreover, it integrates results other databases with predicted and validated miRNA-target interactions. The focus is set on a modular design and extensibility as well as a fast update cycle. The database is available using Python, MySQL and HTML/Javascript Database URL: http://mirwalk.umm.uni-heidelberg.de.
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Carsten Sticht
Carolina De La Torre
Alisha Parveen
PLoS ONE
SHILAP Revista de lepidopterología
Heidelberg University
University Hospital Heidelberg
University Medical Centre Mannheim
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Sticht et al. (Thu,) studied this question.
www.synapsesocial.com/papers/69bc7d74106136e116a13bdc — DOI: https://doi.org/10.1371/journal.pone.0206239