Compost and Beneficial Pseudomonas Populations Promote Enzyme Activity, Amino Acids and Polymers Utilization Patterns in Heavy Metal Contaminated Soils

PGPR-assisted phytoremediation is a biotechnology offering opportunities to improve the state of contaminated soil ecosystems. The present study has investigated the potential of six beneficial isolates tolerant to Cd, Pb, and Zn and identified through 16S rDNA sequential analysis as Bacillus cereus, Pseudomonas putida, and Pseudomonas fluorescens to stimulate spinach growth and soil microbial community development in heavy metal-contaminated soil with or without the addition of compost. We found improved plant growth in all treatments with compost, but especially applying consortiums of isolates. Microbial enzyme activities and basal soil respiration were significantly higher in the rhizosphere and in amended treatments than in non-rhizosphere and control. The microbial community-level physiological profiles in the rhizosphere studied with the Ecoplates of BiologTM system showed increased metabolic potential in treatments with compost and beneficial bacteria. Principal component analysis revealed domination of amino acids and polymers utilizing communities in compost and bacterial consortium amended soils, carbohydrates and amino acids in compost and single strains application, and the lowest representation of amines and amides and phenolic compounds utilizers. Thus, may conclude that the use of quality organic amendments together with beneficial soil bacterial populations is a suitable and promising approach for the phytostabilization of soils contaminated with heavy metals.