Fruitbody and root data infer different environmental niches for ectomycorrhizal fungi

Abstract Aim We used two fungal data sources for occurrence records (fruitbodies and roots) to (1) test the influence of data source on estimating the environmental niche of ectomycorrhizal (ECM) fungi and (2) compare the differences in estimated niche area and density for ECM fungal species with conspicuous (easily observed, i.e. mushrooms) versus inconspicuous (difficult to observe and/or usually overlooked, i.e. crusts and truffles) fruitbodies. Location Europe. Taxon Sixty‐six ectomycorrhizal fungi. Methods We used fungal records obtained from fruitbody and root data of 66 common ECM fungal species in European forests to estimate their environmental niches. The fruitbody data were extracted from public databases (GBIF, UNITE), while the root data (from individual ectomycorrhizas) were obtained from a dataset of 136 ICP Forests long‐term intensive monitoring plots. We estimated the niches for combined data sources (fruitbody and root data) and for each individual data source using six key environmental variables for ECM fungal community composition. We then examined how estimated niche overlap and area (number of cells in niche grid) varied for the two data sources between conspicuous and inconspicuous species. Results We found that although the niches estimated using combined data from the two data sources had high overlap with the niches estimated from fruitbody data, the niches estimated from fruitbody data had low or medium overlap with the niches estimated using root data for most ECM fungi. The overlap between the two data sources for conspicuous species was significantly larger than that for inconspicuous species. Root data were important for estimating the niche of inconspicuous species, which had a high ratio of root data to fruitbody data. Main Conclusion Our results indicate that although fruitbody data suffice for estimating the environmental niche for most conspicuous ECM fungi, combined datasets including fruitbody and root data can improve the accuracy of estimated niches and should be used. Root data for inconspicuous species are particularly useful, and thus, adopting root data in niche estimation will better infer the niches of ECM fungi. Inferring niches along environmental variables can guide future sampling and conservation of fungi.