Random forest machine learning for maize yield and agronomic efficiency prediction in Ghana

Highlights•Random forest modelling of maize yield in Ghana was successful and explained 81 % of the variance.•Random forest modelling of agronomic efficiency was less accurate than for yield and explained between 53 and 63 % of the variance.•Soil variables were more important than climate and other environmental variables in predicting yield.•The random forest model can guide the development of fertilizer recommendations for sustainable maize production.AbstractMaize (Zea mays) is an important staple crop for food security in Sub-Saharan Africa. However, there is need to increase production to feed a growing population. In Ghana, this is mainly done by increasing acreage with adverse environmental consequences, rather than yield increment per unit area. Accurate prediction of maize yields and nutrient use efficiency in production is critical to making informed decisions toward economic and ecological sustainability. We trained the random forest machine learning algorithm to predict maize yield and agronomic efficiency in Ghana using soil, climate, environment, and management factors, including fertilizer application. We calibrated and evaluated the performance of the random forest machine learning algorithm using a 5 × 10-fold nested cross-validation approach. Data from 482 maize field trials consisting of 3136 georeferenced treatment plots conducted in Ghana from 1991 to 2020 were used to train the algorithm, identify important predictor variables, and quantify the uncertainties associated with the random forest predictions. The mean error, root mean squared error, model efficiency coefficient and 90 % prediction interval coverage probability were calculated. The results obtained on test data demonstrate good prediction performance for yield (MEC = 0.81) and moderate performance for agronomic efficiency (MEC = 0.63, 0.55 and 0.54 for AE-N, AE-P and AE-K, respectively). We found that climatic variables were less important predictors than soil variables for yield prediction, but temperature was of key importance to yield prediction and rainfall to agronomic efficiency. The developed random forest models provided a better understanding of the drivers of maize yield and agronomic efficiency in a tropical climate and an insight towards improving fertilizer recommendations for sustainable maize production and food security in Sub-Saharan Africa.