This paper establishes a complete and rigorous multi-layer axiomatic classification system for quantum biology, unifying all major empirical phenomena—including photosynthetic coherence, magnetoreception, olfactory vibration, enzyme tunneling, and DNA quantum effects—within a single, extensible hierarchical framework. The system comprises seven primary layers: Kingdom, Phylum, Class, Order, Family, Genus, and Species, augmented by a set of cross-layer consistency conditions. We present a fully formalized foundation, including 53 independent core axioms, 11 compatibility conditions, and 7 cross-layer consistency axioms, totaling 87 logically independent statements, together with a duality groupoid that captures physical and biological equivalences. We prove the well-definedness and completeness of the classification, the uniqueness of the species construction up to physical equivalence, and the logical independence of the axiom system. A systematic gap analysis reveals infinitely many unexplored branches; we develop an algorithmic procedure for generating their axiom systems and a formal parameter validation protocol. We detail 28 concrete predictions, each with a complete seven-layer axiom system, a main theorem, and a rigorous proof (each ≥ 14 steps; total > 500 proof steps). We further prove strong rigidity for a class of supersymmetric quantum biological systems, establish the NP-completeness and QMA-completeness of the classification decision problem, and construct non-standard quantum biological vacua via forcing with a fully justified spectral decomposition. All previously identified open problems and conjectures are resolved and promoted to theorems. The system provides a unified language, a rigorous mathematical foundation, and a roadmap for future theoretical and experimental research in quantum biology.
shifa liu (Wed,) studied this question.