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December 16, 2019SHILAP Revista de lepidopterología1,444 citationsOpen Access

Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline

SOShujun OuWSWeija SuYLYi Liao

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Abstract

The benchmarking results and pipeline developed here will greatly facilitate TE annotation in eukaryotic genomes. These annotations will promote a much more in-depth understanding of the diversity and evolution of TEs at both intra- and inter-species levels. EDTA is open-source and freely available: https://github.com/oushujun/EDTA.

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Ou et al. (2019) studied this question.

synapsesocial.com/papers/69d76666d55abd294a48f43bhttps://doi.org/10.1186/s13059-019-1905-y
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