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August 12, 2025Nature Communications20 citationsOpen Access

Self-splicing RNA circularization facilitated by intact group I and II introns

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YSYong ShenBLB. L. LiLDLei Dong

Key Points

  • CIRC method demonstrates significantly enhanced RNA circularization efficiency compared to Permuted Intron-Exon in large RNA constructs.
  • CIRC achieves this by utilizing intact group I and group II introns, streamlining circularization processes under mild conditions.
  • These findings suggest that CIRC has reduced immunogenicity when producing scarless circRNA for research and therapeutic endeavors.
  • The study enhances the circRNA platform, addressing size limitations typically encountered in conventional RNA circularization techniques.

Abstract

Circular RNA (circRNA) has gained significant attention in RNA therapeutics due to its enhanced stability and protein-coding potential. In this study, we present two in vitro RNA circularization techniques, namely Permuted Intron-Exon through Trans-splicing (PIET) and Complete self-splicing Intron for RNA Circularization (CIRC). PIET leverages the second step of group I intron splicing, offering an alternative circularization strategy. CIRC utilizes the natural, intact forms of group I and group II introns, eliminating the need for intron engineering. Compared to Permuted Intron-Exon (PIE), CIRC exhibits enhanced RNA circularization efficiency and speed under mild conditions. Using CIRC, we successfully circularize large RNA constructs encoding full-length dystrophin, a protein whose deficiency is linked to Duchenne muscular dystrophy (DMD), thus overcoming size limitations typically associated with circRNA platforms. Notably, CIRC enables the production of scarless circRNA and circRNA with minimal immunogenicity. Additionally, CIRC supports streamlined circRNA purification using ribonuclease R (RNase R) or oligo(dT)-based methods. These advancements significantly expand the potential of the circRNA platform for both research and therapeutic applications. RNA circularization is vital for circRNA therapeutics. Here, authors present two in vitro methods—PIET and CIRC—where CIRC employs intact self-splicing introns to generate circRNAs efficiently, and enables large circRNA generation, broadening the circRNA platform's potential.

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Cite This Study

Shen et al. (2025) studied this question.

synapsesocial.com/papers/68a360f20a429f7973329bechttps://doi.org/10.1038/s41467-025-62607-y
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