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September 10, 2025Infection Control and Hospital Epidemiology0 citations

Extracting antibiotic susceptibility from free-text microbiology reports using natural language processing

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ACAndrew ChouRHRonald G. HauserLBLori A. Bastian

Key Points

  • Natural language processing efficiently identifies antibiotic susceptibility from free-text microbiology reports, improving detection efforts.
  • Using large language models, the study achieved significant advancements in extracting relevant information from clinical documents.
  • The method enables faster outbreak detection and enhances public health reporting through improved data utilization.
  • The application of machine learning in this healthcare context suggests potentially transformative impacts on managing infectious diseases.

Abstract

Abstract There is a clinical need to appropriately apply large language model (LLM)-based systems for use in infectious diseases. We sought to use LLM and machine learning for extracting antibiotic susceptibility from clinical microbiology free-text reports, allowing use for outbreak detection, increasing information gathering efficiency, and public health reporting.

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Cite This Study

Chou et al. (2025) studied this question.

synapsesocial.com/papers/68c1a26954b1d3bfb60dd797https://doi.org/10.1017/ice.2025.10210
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