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October 20, 20250 citationsOpen Access

Revisiting Multivariate Time Series Forecasting with Missing Values

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JYJie YangYHY. HuKZKexin Zhang

Key Points

  • Direct prediction from partially observed time series enhances accuracy, reducing reliance on imputation techniques.
  • CRIB outperforms traditional frameworks, demonstrating effectiveness across multiple real-world datasets with high missing values.
  • Utilizes a novel consistency-regularized information bottleneck approach integrating attention mechanisms for better noise filtering.
  • Findings highlight the degradation of prediction accuracy due to imputation errors, emphasizing a shift in methodology.

Abstract

Missing values are common in real-world time series, and multivariate time series forecasting with missing values (MTSF-M) has become a crucial area of research for ensuring reliable predictions. To address the challenge of missing data, current approaches have developed an imputation-then-prediction framework that uses imputation modules to fill in missing values, followed by forecasting on the imputed data. However, this framework overlooks a critical issue: there is no ground truth for the missing values, making the imputation process susceptible to errors that can degrade prediction accuracy. In this paper, we conduct a systematic empirical study and reveal that imputation without direct supervision can corrupt the underlying data distribution and actively degrade prediction accuracy. To address this, we propose a paradigm shift that moves away from imputation and directly predicts from the partially observed time series. We introduce Consistency-Regularized Information Bottleneck (CRIB), a novel framework built on the Information Bottleneck principle. CRIB combines a unified-variate attention mechanism with a consistency regularization scheme to learn robust representations that filter out noise introduced by missing values while preserving essential predictive signals. Comprehensive experiments on four real-world datasets demonstrate the effectiveness of CRIB, which predicts accurately even under high missing rates. Our code is available in https://github.com/Muyiiiii/CRIB.

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Cite This Study

Yang et al. (2025) studied this question.

synapsesocial.com/papers/68f6379bb481a140a36cf45ehttps://doi.org/10.48550/arxiv.2509.23494
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