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December 10, 2025Nature Communications7 citationsOpen Access

Convergence of plasmid-driven virulence and antibiotic resistance in Escherichia coli

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ZLZheng Jie LianNNNguyen Thi Khanh NhuCRChitra Ravi

Key Points

  • To investigate the convergence of virulence and antibiotic resistance genes in plasmids of Escherichia coli.
  • Generated and analyzed a ColV-like plasmid (ColVLP) database.
  • Characterized sub-groups of ColVLPs based on gene profiles.
  • Demonstrated interactions of a ColVLP-encoded protease with chromosomal factors.
  • Identified four distinct ColVLP sub-groups with varying resistance and virulence gene profiles.
  • Three sub-groups showed moderate-high resistance to multiple antibiotic classes.
  • ColVLP co-integrates exhibited extensive resistance, including to colistin.

Abstract

Abstract Plasmids are major vehicles for the spread of antibiotic resistance genes. Some plasmids additionally carry virulence genes that enhance host pathogenicity. The convergence of resistance and virulence genes on the same plasmid poses significant risk, providing a mechanism to create pathogens that cause severe disease with limited treatment options. Colicin V (ColV)-like plasmids (ColVLPs) are virulence plasmids frequently carried by extra-intestinal pathogenic E. coli (ExPEC) that cause human and avian infection. Here, by generating and analysing a ColVLP database, we demonstrate that ColVLPs form four distinct sub-groups, characterised by genes encoding for Colicins V and M, with differing virulence and antimicrobial resistance gene carriage. Three of these sub-groups possess moderate-high resistance towards multiple antibiotic classes. We further describe ColVLP co-integrates that have acquired extensive resistance profiles, including against last line colistin, through recombination with co-resident plasmids. Using pMS7163A, a ColVLP from a virulent ExPEC strain, we also demonstrate that the ColVLP-encoded outer membrane protease virulence factor OmpTp works co-operatively with its chromosomal homolog to enhance ExPEC resistance against human cathelicidin (LL-37), an antimicrobial peptide expressed in the urinary tract. Together, our work characterises ColVLPs as high-risk mobile genetic elements that amplify the convergence of resistance and virulence in ExPEC.

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Cite This Study

Lian et al. (2025) studied this question.

synapsesocial.com/papers/69401b3d2d562116f28f8289https://doi.org/10.1038/s41467-025-67202-9
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