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January 22, 2026Current Issues in Molecular Biology0 citationsOpen Access

Correlation of MLASA2 Clinical Phenotype and Survival with Mt-TyrRS Protein Damage: Linking Systematic Review, Meta-Analysis and 3D Hotspot Mapping

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JVJosé Rafael Villafán-BernalAMAngélica Martínez-HernándezHGHumberto Garcia‐Ortíz

Key Points

  • This study aims to investigate the relationship between Mt-TyrRS protein damage and survival rates in MLASA2.
  • Conducted a systematic review and meta-analysis of published MLASA2 cases.
  • Analyzed survival rates using survival modeling techniques.
  • Developed a 3D structural map of Mt-TyrRS protein highlighting pathogenic variant hotspots.
  • Anemia, sideroblastic phenotype, and lactic acidosis were prevalent in 88.6%, 85.7%, and 82.9% of cases, respectively.
  • Survival estimates were 94.1% at 10 years, 70.7% at 30 years, and 42.4% at 50 years.
  • Identified nine spatial hotspots on the Mt-TyrRS protein associated with different risk clusters.

Abstract

Myopathy, Lactic Acidosis, and Sideroblastic Anemia type 2 (MLASA2) is a rare mitochondrial disorder caused by pathogenic variants (PVs) in the YARS2 gene (which encodes the Mt-TyrRS protein. We performed a comprehensive clinical–molecular synthesis by integrating a systematic review and meta-analysis of all published MLASA2 cases with survival modeling and three-dimensional structural mapping. Across the aggregated cohort, anemia (88.6%), sideroblastic phenotype (85.7%), and lactic acidosis (82.9%) were the most prevalent phenotypes. Fifteen PVs were identified, dominated by p.(Phe52Leu) (29.4%). Survival estimates were 94.1% at 10 years, 70.7% at 30 years, and 42.4% at 50 years; cardiomyopathy and diagnosis before age 10 were associated with decreased survival. We generated the first 3D structural map of all reported Mt-TyrRS PVs, identifying nine spatial hotspots across catalytic, anticodon-binding, and tRNA-binding domains. An integrated framework combining structural density, clinical severity, in silico predictions, and ΔΔG destabilization classified three clusters as High-risk, three as Medium-risk, and three as Low-risk. Among them, cluster 3, a large catalytic hotspot encompassing 44 residues and including nearly half of all MLASA2 cases, showed the strongest pathogenic convergence. This clinical–structural integration provides new insights for a better comprehension of MLASA2, enhancing variant interpretation and improving diagnostic and prognostic precision.

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Cite This Study

Villafán-Bernal et al. (2026) studied this question.

synapsesocial.com/papers/6971bd90642b1836717e241chttps://doi.org/10.3390/cimb48010095
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