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February 8, 20260 citationsOpen Access

Circulation of polyclonal OXA-244-producing Escherichia coli lineages in Jerusalem, Israel

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JSJanko SattlerYOYonatan OsterHSHelena M B Seth Smith

Key Points

  • This research aims to assess the prevalence and genetic characteristics of OXA-244-producing Escherichia coli in a Jerusalem hospital.
  • Identified 171 patients with OXA-48-like-producing E. coli in 2024.
  • Selected 53 isolates for whole genome characterization using short-read sequencing and long-read sequencing.
  • Analyzed mode of acquisition, phylogeny, resistome, and genetic context of blaOXA-244.
  • 34 of 53 sequenced isolates harbored bla OXA-244, while 11 had bla OXA-48 and 8 had bla OXA-181.
  • 88.2% of OXA-244 strains were classified as healthcare-associated; 11.8% as community-acquired.
  • Identified 13 distinct sequence types (STs) and 7 genomic clusters indicating close ancestry.

Abstract

Background and objectives: OXA-244-producing Escherichia coli represents an emerging concern in Europe due to its rapid spread and difficult-to-detect phenotype. While other OXA-48-like carbapenemases emerged in Israel in 2007, the circulation of OXA-244-producing E. coli was only recently reported. We aimed to investigate the proportion of OXA-244 amongst OXA-48-like-producing E. coli in a tertiary care university hospital in Jerusalem, Israel, during 2024. We analysed their mode of acquisition, phylogeny, resistome, and the genetic context of blaOXA-244 in these isolates. Patients and methods: In 2024, 171 patients were identified with OXA-48-like-producing E. coli from screening or clinical samples. Of these, 53 were selected using convenience sampling across the entire year for whole genome characterization using short-read sequencing and a subset also underwent long-read sequencing. Results: Amongst the 53 sequenced OXA-48-like-producing E. coli, the majority harboured bla ₎ₗ₀-₂₄₄ (n = 34), followed by bla ₎ₗ₀-₄₈ (n = 11), and bla ₎ₗ₀-₁₈₁ (n = 8). Of the 34 OXA-244-producing E. coli, transmission was classified as probably or possibly healthcare-associated for 88. 2%, and community-acquired for 11. 8%. The OXA-244-producing E. coli isolates belonged to 13 distinct STs that mainly matched internationally described clones. Core genome MLST demonstrated seven genomic clusters (≤10 allele differences), indicating close common ancestry. Long-read sequencing demonstrated that bla ₎ₗ₀-₂₄₄ was chromosomally located within variants of the transposon Tn51098 across STs. Conclusions: This study demonstrates the predominance of OXA-244-producing E. coli in a tertiary care hospital in Jerusalem, Israel among OXA-48-like-producing isolates. The clonal diversity points to ongoing unrecognized community transmission, necessitating targeted surveillance and control measures.

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Cite This Study

Sattler et al. (2025) studied this question.

synapsesocial.com/papers/698828770fc35cd7a8847ff4https://doi.org/10.5167/uzh-290736
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