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February 19, 20260 citationsOpen Access

Why Open Large Language Models Matter in Rheumatology Research: a Scoping Review

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AGAlfredo Madrid GarcíaBMBeatriz Merino-BarbanchoDNDalifer Freites Núñez

Key Points

  • This research aims to identify and evaluate how large language models are used in rheumatology, focusing on their openness and reporting practices.
  • Conducted a systematic search of PubMed/MEDLINE for relevant English-language studies published from November 2022 to January 2026.
  • Two reviewers screened articles independently, with a third resolving any disagreements.
  • Data extraction involved evaluating study characteristics, model types, and transparency indicators.
  • Out of 185 records screened, 63 studies were included, mainly focused on research and education.
  • 79.37% of studies relied on closed-source large language models, with only 6.35% using open-weight models exclusively.
  • Reporting of essential reproducibility details was inconsistent, with only a small fraction providing publicly available code and data.

Abstract

Why Open Large Language Models Matter in Rheumatology Research: a Scoping Review Objectives: To systematically identify and characterize original rheumatology research using large language models (LLMs), quantify reliance on closed versus open models, and assess reporting practices relevant to reproducibility (model versions, prompts, inference settings, and availability of code/data), in order to propose practical recommendations to strengthen transparency. Methods: We searched PubMed/MEDLINE for English-language peer-reviewed original research published from 1 November 2022 to 23 January 2026. Two reviewers independently screened title/abstract and full texts, with a third resolving disagreements. Data were extracted using an LLM-assisted workflow and then independently verified against source articles by the authors. Extracted items included study characteristics, model families and openness, access mode, versioning/timing, and transparency indicators (prompts, code, data). Results: Of 185 screened records, 63 studies were included. Most were research (n = 33/63; 52.38%) or education-focused (n = 24/63; 38.10%). Studies predominantly used closed-source LLMs (n = 50/63; 79.37%), with limited exclusive use of open-weight models (n = 4/63; 6.35%) and some hybrid use (n = 9/63; 14.29%). OpenAI models were most common (n = 55/63; 87.30%). Reporting was heterogeneous: interaction language was often not reported (n = 42/63; 66.67%); access mode was reported in (n = 19/63; 30.16%); output generation date in (n = 33/63; 52.38%). Prompts were shared in (n = 48/63; 76.19%), but code was publicly available in (n = 4/63; 6.35%), and data in (n = 13/63; 20.63%). Conclusions: LLM-based rheumatology research largely depends on closed models with inconsistent reporting of reproducibility-critical details and minimal code sharing. A concise, rheumatology-oriented checklist is proposed to standardize reporting and improve auditability, replication, and cross-study comparability.

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Cite This Study

García et al. (2026) studied this question.

synapsesocial.com/papers/6996a818ecb39a600b3ee735https://doi.org/10.5281/zenodo.18664584
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