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February 21, 2026Biophysical Journal0 citations

BPS2026 – Structure and dynamics of drug binding to Flpp3, a virulence factor in tularemia

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MAM. Asgari

Key Points

  • This research aims to understand the structure and dynamics of drug binding to Flpp3, a virulence factor in tularemia.
  • Conducted structural analysis to identify charged regions and internal cavity of Flpp3.
  • Assessed the binding affinity of drug candidates from the ZINC database to the Flpp3 protein cavity.
  • Expressed and purified Flpp3 for further interaction studies using NMR spectroscopy.
  • Analyzed docking compounds using principal-component analysis (PCA).
  • Identified Flpp3 as a promising target for drug design against tularemia.
  • Determined key binding interactions and energetics of candidate drug molecules.
  • Outlined future research directions for characterizing dynamic interactions of selected compounds with Flpp3.

Abstract

Tularemia is a potentially fatal bacterial disease caused by Francisella tularensis , prevalent in North America and across northern Europe and Asia. The outer membrane lipoprotein Flpp3 has been identified as both a virulence factor and a promising target for subunit-based vaccine development. Structural analysis of Flpp3sol reveals a distinctly polarized surface, with regions of strong positive and predominant negative charge, and a hydrophobic internal cavity formed primarily by an elongated loop. 1,2 To explore potential therapeutic interventions, we computationally assessed the binding affinity of candidate drug molecules from the ZINC database 3 to the protein cavity, obtaining docking energies. Experimentally, we expressed and purified Flpp3sol to prepare it for further experimental investigations of the binding interactions by NMR. Future work will involve analyzing the docked compounds, selecting promising candidates via principal-component analysis (PCA), and characterizing their structural and dynamic interactions with the protein using NMR spectroscopy. This integrated computational and experimental approach aims to identify and characterize potential drug candidates targeting Flpp3, providing insights for rational drug design against F. tularensis .

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Cite This Study

M. Asgari (2026) studied this question.

synapsesocial.com/papers/69990de85b97ab4c14ac2a38https://doi.org/10.1016/j.bpj.2025.11.1746
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