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February 27, 20260 citationsOpen Access

Boundcosm: A Reproducible Measurement Standard for State-Space Inference in Multimodal Biological Data

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AAAli Alshanqeeti

Key Points

  • The aim is to create a reproducible measure for state-space inference in biological systems.
  • Introduced formal constraints on proxy construction and redundancy auditing.
  • Defined protocols for surrogate-null testing and anchor requirements.
  • Developed a framework for partial state-vector assembly.
  • Transformed state-space inference into a reproducible measurement process.
  • Provided a publically available reproducibility package with locked preprocessing and analysis scripts.

Abstract

Boundcosm introduces a computational measurement standard for reproducible state-space inference in multimodal biological systems. Rather than proposing a new modeling architecture, the framework defines formal constraints on proxy construction, redundancy auditing, surrogate-null testing, anchor requirements, and partial state-vector assembly. The goal is to transform state-space inference from an interpretive modeling exercise into a reproducible measurement process. The public release includes a fully archived reproducibility package with locked preprocessing specifications and analysis scripts corresponding to all empirical examples. The software archive is available at Zenodo under the Boundcosm reproducibility package (v1.1).

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Cite This Study

Ali Alshanqeeti (2026) studied this question.

synapsesocial.com/papers/69a1352fed1d949a99abece9https://doi.org/10.5281/zenodo.18768209
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