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February 28, 2026Cancer Discovery2 citations

Rational design of immune gene therapy combinations via in vivo CRISPR activation screen of tumor microenvironment modulators

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FZFeifei ZhangCDChuanpeng DongRCRyan D. Chow

Key Points

  • This research aims to identify tumor microenvironment modulators that promote anti-tumor immunity through CRISPR activation.
  • Conducted an in vivo CRISPR activation screen targeting tumor microenvironment
  • Focused on multiplexed activation of immune-related genes
  • Identified key immunostimulatory factors in metastatic tumors
  • Developed a gene therapy combination of TNFSF9, IFNG, and IL12B
  • Identified CD80, TNFSF14, CXCL10, TNFSF18, TNFSF9, and IFNG as key candidates
  • AAV-4II combination therapy improved antigen presentation and T cell activation
  • Preconditioning with AAV-4II enhanced efficacy of existing CAR-T and TCR-T therapies
  • Showed significant suppression of both primary and metastatic solid tumors in animal models

Abstract

Abstract The hostile tumor microenvironment (TME) remains a major challenge for cancer immunotherapy. Here, we performed TME-targeted in vivo CRISPR activation (CRISPRa) screen to identify factors that promote anti-tumor immunity, culminating in rationally designed immune gene therapy combinations. Multiplexed activation of genes encoding antigen presentation, T cell proliferation, co-stimulation, and migration (APCM) leads to enhanced anti-tumor responses. An APCM-focused CRISPRa screen in metastatic tumors identified CD80, TNFSF14, CXCL10, TNFSF18, TNFSF9, and IFNG as top immunostimulatory candidates. Further optimization pinpointed TNFSF9 (4-1BBL) + IFNG + IL12B (4II) as a potent therapeutic combination. AAV-4II enhanced antigen presentation, T cell activation, proliferation, cytotoxicity, and tumor infiltration. Preconditioning the TME with AAV-4II synergized with CAR-T and TCR-T cell therapies to suppress primary and metastatic solid tumors in vivo. These findings establish TME-targeted CRISPRa screening as a rapid route to develop immune gene therapy combinations against solid tumors.

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Cite This Study

Zhang et al. (2026) studied this question.

synapsesocial.com/papers/69a287570a974eb0d3c02ebahttps://doi.org/10.1158/2159-8290.cd-25-0545
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