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April 1, 2026European journal of medical research0 citationsOpen Access

Unveiling potential biomarkers for systemic lupus erythematosus and lupus nephritis through metabolomics and machine learning

MLMingwang LongXFXue FuZYZhenxuan Ye

Key Points

  • The aim is to discover new biomarkers for the diagnosis of systemic lupus erythematosus and lupus nephritis using metabolomics.
  • Conducted non-targeted metabolomics on plasma samples from healthy controls, SLE patients, and LN patients.
  • Identified differentially expressed metabolites across the groups.
  • Employed machine learning to assess the diagnostic capability of metabolites with clinical indicators.
  • Identified 374 metabolites in SLE vs. healthy controls, 528 in LN vs. healthy controls, and 400 in LN vs. SLE.
  • 3-Hydroxymethyl-Picumast showed the most significant decrease in lupus nephritis patients.
  • Combination of 3-Hydroxymethyl-Picumast, C3, and 3Beta, 7Alpha-Dihydroxy-5-Cholestenoate achieved an AUC of 72.92% in diagnostic accuracy.

Abstract

Systemic lupus erythematosus (SLE) is a common autoimmune disorder with increasing global incidence. Lupus nephritis (LN), a severe complication of SLE, occurs in approximately 50% of patients and is a leading cause of morbidity and mortality. This study aims to identify novel diagnostic biomarkers to facilitate the diagnosis of SLE and LN. Using non-targeted metabolomics, we analyzed plasma samples from healthy controls (HC), SLE patients and LN patients to identify differentially expressed metabolites. Machine learning approaches were applied to evaluate the diagnostic potential of these metabolites alone or in combination with clinical indicators. We identified 374, 528 and 400 differentially expressed metabolites in SLE vs. HC, LN vs. HC and LN vs. SLE, respectively. Among these, 3-Hydroxymethyl-Picumast showed the most pronounced decreasing trend in LN vs. SLE vs. HC. ROC analysis revealed that the combination of 3-Hydroxymethyl-Picumast, C3 and 3Beta, 7Alpha-Dihydroxy-5-Cholestenoate yielded the highest diagnostic accuracy (AUC = 72.92%). C3 alone exhibited the highest sensitivity (100%). 3Beta, 7Alpha-Dihydroxy-5-Cholestenoate showed the highest specificity (97.36%). Our findings suggest that 3-Hydroxymethyl-Picumast, particularly in combination with C3 and 3Beta, 7Alpha-Dihydroxy-5-Cholestenoate, holds promise as a diagnostic biomarker for distinguishing LN from SLE. This approach may enhance diagnostic evaluation, offering a theoretical foundation for improved clinical management.

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Cite This Study

Long et al. (2026) studied this question.

synapsesocial.com/papers/69ccb62016edfba7beb87d3ehttps://doi.org/10.1186/s40001-026-04290-3
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