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April 1, 2026International Journal of Molecular Sciences0 citationsOpen Access

Determinants of Rice Grain Quality: Synergistic Roles of Genetics, Environment, and Agronomic Practices

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LTLiqun TangHFHonghuan FanJWJunmin Wang

Key Points

  • The aim is to understand the integrated effects of genetics, environment, and agronomic practices on rice grain quality.
  • Reviewed advances in genetic architecture and key genes affecting rice quality
  • Examined the impact of environmental stresses on grain quality
  • Discussed optimized agronomic practices to enhance quality
  • Identified key genes and QTLs associated with starch composition and grain dimensions
  • Noted that high temperatures and drought negatively impacted milling yield and increased chalkiness
  • Recommended integrated strategies for improving rice quality under climate variability

Abstract

Rice (Oryza sativa L.) grain quality is a critical determinant of market value, consumer acceptance, and nutritional security. This multifaceted trait is governed by the dynamic interaction of genotype (G), environment (E), and management practices (M). In this review, we synthesize recent advances in understanding these multifaceted determinants. We first delineate the genetic architecture, emphasizing key genes and quantitative trait loci (QTLs) such as Wx, ALK, Chalk5, and the GS3/GW families, which control starch composition, gelatinization temperature, chalkiness, and grain dimensions, forming the foundational blueprint for quality potential. We examine how this genetic potential is influenced by environmental factors, focusing on the detrimental impacts of abiotic stresses, particularly high temperatures during grain filling and drought, which impair milling yield, increase chalkiness, and modify starch and protein profiles. Furthermore, we discuss how optimized agronomic strategies—including precision water management (e.g., alternate wetting and drying), balanced nitrogen fertilization, and targeted micronutrient (e.g., silicon) application—can mitigate these adverse effects and potentially improve specific quality parameters. Post-harvest handling is identified as the final determinant of product quality. We conclude that achieving high and stable rice quality under climate variability requires an integrated G × E × M approach. Prospects include next-generation breeding for climate-resilient quality, precision agronomy guided by real-time sensing, synergistic soil health management, and the integration of systems biology with digital agriculture to design sustainable, high-quality rice production systems.

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Cite This Study

Tang et al. (2026) studied this question.

synapsesocial.com/papers/69ccb7b016edfba7beb89b94https://doi.org/10.3390/ijms27073088
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