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October 15, 2012Bioinformatics3,367 citationsOpen Access

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

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EKEvguenia KopylovaLNLaurent NoéHTHélène Touzet

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Abstract

We present SortMeRNA, a new software designed to rapidly filter rRNA fragments from metatranscriptomic data. It is capable of handling large sets of reads and sorting out all fragments matching to the rRNA database with high sensitivity and low running time.

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Kopylova et al. (2012) studied this question.

synapsesocial.com/papers/69d70e4e41375cf86eed8f6dhttps://doi.org/10.1093/bioinformatics/bts611
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