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April 14, 2026New Phytologist2 citationsOpen Access

Vernalization regulatory network identifies potential novel functions for genes in the HvVRN2 locus

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FMFrancesc Montardit‐TardaIPIrene PuyoBCBruno Contreras‐Moreira

Key Points

  • This research aims to explore the regulatory roles of the HvVRN2 locus in barley's flowering process and other related functions.
  • Utilized near-isogenic lines with varying presence of HvVRN2 genes.
  • Applied different lengths of vernalization treatments to assess gene expression dynamics.
  • Conducted a regulatory network analysis to identify candidate genes for flowering and vernalization.
  • Performed protein modeling to study interaction stability with NF-Y.
  • Discovered unique expression levels for HvVRN2a and HvVRN2b under different conditions.
  • Identified impacts of HvVRN2 on tillering and flowering regulation.
  • Revealed new candidate genes related to flowering regulation in the vernalization pathway.
  • Protein modeling indicated higher stability of VRN2-NF-Y complexes compared to other CCT-NF-Y complexes.

Abstract

Summary Flowering is controlled by environmental and genetic factors. Vernalization requirement in barley ( Hordeum vulgare L.) is determined by the allele in HvVRN1 and the presence of locus HvVRN2 , which consists of two zinc‐finger and CONSTANS‐like domains ( ZCCT) genes: HvVRN2a and HvVRN2b . While the effect of HvVRN2 presence is well known, its outcome on the transcriptome and other genes outside the flowering/vernalization pathway remains unknown. Near‐isogenic lines, with presence/absence of HvVRN2 , were subjected to vernalization treatments of different lengths, enabling the assessment of HvVRN2 expression dynamics as well as broader transcriptional responses regulated by VRN2. Unknown differences in expression levels of the two HvVRN2 genes were identified, as well as an effect on tillering. A regulatory network analysis pointed at new candidate genes for flowering regulation related to the vernalization pathway and suggested additional biological roles for HvVRN2b . Finally, protein modelling resulted in higher VRN2‐Nuclear Factor‐Y (NF‐Y) stability than other CCT‐NF‐Y complexes. This study advances in the understanding of HvVRN2 in barley adaptation. The ZCCT genes within the HvVRN2 locus should be regarded as distinct genes and may possess broader adaptive functions than previously recognized. Flowering repression by HvVRN2 may take place at the protein level, potentially inhibiting formation of other CCT/NF‐YB/NF‐YC complexes that activate HvFT1 transcription.

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Cite This Study

Montardit‐Tarda et al. (2026) studied this question.

synapsesocial.com/papers/69ddda22e195c95cdefd7a5dhttps://doi.org/10.1111/nph.71162
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