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April 26, 2026Science Advances0 citationsOpen Access

Conserved noncoding sequence-9 regulates NFATc1-mediated IL-10 expression in B cells to control inflammatory responses

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SKS. KimJNJaegyun NohHPHye Eun Park

Key Points

  • This research aims to elucidate the mechanisms regulating IL-10 expression in B cells, focusing on the role of CNS-9 and NFATc1.
  • Identified CNS-9 as a regulatory element for IL-10 in mouse B cells.
  • Conducted genomic analyses to assess the function of CNS-9 as an enhancer bound by NFATc1.
  • Utilized flow cytometry to characterize IL-10 production by B1a cells and employed a mouse model of LPS-induced sepsis.
  • Deletion of CNS-9 or B cell-specific NFATc1 decreased IL-10 production and worsened inflammation, reducing survival rates.
  • CNS-9 functioned by facilitating chromatin looping between itself and the IL-10 promoter through NFATc1 binding.
  • The human homolog, CNS-12, demonstrated similar regulatory effects through NFATc1 mechanisms.

Abstract

Interleukin-10 (IL-10) production by B cells plays a critical role in regulating inflammatory responses, yet the mechanisms controlling its expression remain poorly understood. We identified a conserved noncoding sequence (CNS-9) as an essential regulatory element for IL-10 expression in mouse B cells. Comprehensive genomic analyses revealed that CNS-9 functions as an enhancer bound by the transcription factor NFATc1, which facilitates chromatin looping between CNS-9 and the IL-10 promoter to drive transcription. Flow cytometry analyses identified B1a cells as the predominant source of B cell-derived IL-10, with this production critically dependent on NFATc1-mediated CNS-9 regulation. In a mouse model of LPS-induced sepsis, deletion of CNS-9, B cell–specific NFATc1, or both resulted in reduced IL-10 production, exacerbated inflammatory responses, and decreased survival. Furthermore, we demonstrated that the human homolog, CNS-12, functions similarly through NFATc1-dependent mechanisms. These findings establish a conserved regulatory pathway controlling IL-10 expression in B cells with notable implications for inflammatory disease pathogenesis and potential therapeutic interventions.

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Cite This Study

Kim et al. (2026) studied this question.

synapsesocial.com/papers/69edad4b4a46254e215b4e45https://doi.org/10.1126/sciadv.aec7779
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