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April 28, 2026Stem Cell Research & Therapy1 citationsOpen Access

Induction of fibrosis in human kidney organoids delineates mechanisms and therapeutic targets of fibrotic kidney disease

MDMarkus C. DoeserJRJulia RaimannMBMaren Beuke

Key Points

  • The aim is to characterize the fibrotic phenotype in kidney organoids and identify potential therapeutic targets for fibrotic kidney disease.
  • Three-dimensional kidney organoids were generated from human pluripotent stem cells.
  • Organoids were exposed to TGF-β1 cytokine to induce fibrosis and analyzed using RNA sequencing and histology.
  • Differential regulation of pathways associated with kidney fibrosis was assessed.
  • TGF-β1 exposure induced hallmark features of kidney fibrosis, including tubular atrophy and glomerulosclerosis.
  • RNA sequencing revealed key pathways affected, such as epithelial-to-mesenchymal transition and JAK/STAT signaling.
  • Inhibition of the PIM1 mediator reduced fibrosis in the organoids, showing potential for therapeutic intervention.

Abstract

Abstract Background Developing regenerative therapies to restore kidney function in patients with progressive renal disease represents a major challenge for modern molecular nephrology. Kidney organoids, three-dimensional kidney-like structures, which can now be generated by the directed differentiation of human pluripotent stem cells, have emerged as a powerful tool to study kidney development, physiology, and mechanisms of renal disease in vitro. Ultimately, kidney organoids may serve as an experimental platform to unravel the pathomechanisms of renal fibrosis and to test regenerative treatment approaches targeting fibrotic kidney diseases. However, the fibrotic phenotype in kidney organoids and its utility as a disease model remain to be fully characterized. Methods Three-dimensional self-organizing kidney organoids containing nephrons and stromal cells were exposed to TGF-β1 cytokine to induce fibrotic remodeling. Organoids were analyzed by RNA sequencing and histology. Results Activation of TGF-β1 signaling in kidney organoids induced hallmarks of human kidney fibrosis, such as tubular atrophy, glomerulosclerosis, and interstitial fibrosis. RNA sequencing highlighted differential regulation of key pathways in kidney fibrosis: epithelial-to-mesenchymal transition, inflammation, metabolism, and JAK/STAT signaling. We identified candidate mediators of kidney fibrosis such as the JAK-STAT downstream target PIM1. Inhibition of PIM1 with the small molecule AZD1208 attenuated fibrosis development in the organoids. Conclusions Kidney organoids are an amenable system for modeling kidney fibrosis and may guide therapeutic discovery.

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Cite This Study

Doeser et al. (2026) studied this question.

synapsesocial.com/papers/69f04e5b727298f751e72411https://doi.org/10.1186/s13287-026-05030-4
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