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May 9, 2026Frontiers in Medicine0 citationsOpen Access

Folate metabolism–based risk stratification identifies CYP27B1 as a determinant of tumor progression in HNSCC

KZKai ZhangBLbingya LiuHHHaixia Hu

Key Points

  • The study aims to establish a relationship between folate metabolism and tumor progression in head and neck squamous cell carcinoma (HNSCC).
  • Developed a folate metabolism-related gene signature using TCGA transcriptomic data.
  • Constructed an 11-gene model via LASSO and multivariate Cox regression to stratify patients.
  • Utilized a nomogram integrating clinical variables to evaluate predictive performance.
  • The 11-gene model effectively stratified patients into distinct survival groups (p<0.001).
  • High FMRG_score correlated with reduced anti-tumor immune infiltration and increased immunosuppression.
  • CYP27B1 knockdown enhanced cisplatin sensitivity and suppressed malignant phenotypes.

Abstract

Head and neck squamous cell carcinoma (HNSCC) is characterized by frequent recurrence and poor survival, highlighting the need for reliable biomarkers for risk stratification and therapeutic guidance. Folate-mediated one-carbon metabolism has been linked to tumor development; however, its prognostic and immunological relevance in HNSCC remains unclear. Using The Cancer Genome Atlas (TCGA) transcriptomic data, we developed and validated a folate metabolism–related gene signature (FMRGₛcore). An 11-gene model constructed by least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression effectively stratified patients into distinct survival groups and served as an independent prognostic factor. A nomogram integrating FMRGₛcore with clinical variables demonstrated favorable predictive performance. Functional enrichment analyses revealed activation of oncogenic pathways in high-risk tumors. Immune deconvolution indicated that elevated FMRGₛcore was associated with reduced anti-tumor immune infiltration, increased macrophage-related signals, and an immunosuppressive tumor microenvironment. Drug response prediction suggested higher estimated IC 50 values in the high-risk group, showing potential chemoresistance. Mechanistically, CYP27B1 knockdown suppressed malignant phenotypes and enhanced cisplatin sensitivity. Collectively, these findings establish folate metabolism as a metabolic–immune axis in HNSCC and suggest that the FMRGₛcore may serve as a prognostic and therapeutic stratification tool.

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Cite This Study

Zhang et al. (2026) studied this question.

synapsesocial.com/papers/69fece83b9154b0b82875f36https://doi.org/10.3389/fmed.2026.1814665
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