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November 23, 2016Clinical Chemistry8 citationsOpen Access

Issues and Challenges in Diagnostic Sequencing for Inherited Cardiac Conditions

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RWRoddy WalshSCStuart A. Cook

Key Result

Diagnostic sequencing is integral for managing inherited cardiac conditions, primarily enabling cascade screening, but expanded testing requires rigorous variant interpretation and domain knowledge.

Structured PICO

P
Population
Patients with inherited cardiac conditions (cardiomyopathies, arrhythmias, aortopathies, and dyslipidemias) and their family members
I
Intervention
Diagnostic sequencing / clinical genetic testing

Diagnostic sequencing is an integral tool for managing inherited cardiac conditions, particularly for cascade screening, but its expanded use requires rigorous variant interpretation and a deeper understanding of underlying genetic mechanisms.

Limitations

  • Expanded testing requires great rigor in the identification of pathogenic variants, with domain-specific knowledge required for variant interpretation.

Abstract

BACKGROUND: Inherited cardiac conditions are a relatively common group of Mendelian diseases associated with ill health and death, often in the young. Research into the genetic causes of these conditions has enabled confirmatory and predictive diagnostic sequencing to become an integral part of the clinical management of inherited cardiomyopathies, arrhythmias, aortopathies, and dyslipidemias. CONTENT: Currently, the principle benefit of clinical genetic testing is the cascade screening of family members of patients with a pathogenic variant, enabling targeted follow up of presymptomatic genotype-positive individuals and discharge of genotype-negative individuals to health. For the affected proband, diagnostic sequencing can also be useful in discriminating inherited disease from alternative diagnoses, directing treatment, and for molecular autopsy in cases of sudden unexplained death. Advances in sequencing technology have expanded testing panels for inherited cardiac conditions and driven down costs, further improving the cost-effectiveness of genetic testing. However, this expanded testing requires great rigor in the identification of pathogenic variants, with domain-specific knowledge required for variant interpretation. SUMMARY: Diagnostic sequencing has the potential to become an integral part of the clinical management of patients with inherited cardiac conditions. However, to move beyond just confirmatory and predictive testing, a much greater understanding is needed of the genetic basis of these conditions, the role of the environment, and the underlying disease mechanisms. With this additional information it is likely that genetic testing will increasingly be used for stratified and preventative strategies in the era of genomic medicine.

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Cite This Study

Walsh et al. (2016) conducted a review in Inherited cardiac conditions. Diagnostic sequencing was evaluated. Diagnostic sequencing is integral for managing inherited cardiac conditions, primarily enabling cascade screening, but expanded testing requires rigorous variant interpretation and domain knowledge.

synapsesocial.com/papers/6a0a949c700cef80f8708e01https://doi.org/10.1373/clinchem.2016.254698
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