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January 1, 1989Computer applications in the biosciences1,229 citations

Fast and sensitive multiple sequence alignments on a microcomputer

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DHDesmond G. HigginsUniversity College DublinPSPaul M. SharpRutgers, The State University of New Jersey

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Abstract

A strategy is described for the rapid alignment of many long nucleic acid or protein sequences on a microcomputer. The program described can handle up to 100 sequences of 1200 residues each. The approach is based on progressively aligning sequences according to the branching order in an initial phylogenetic tree. The results obtained using the package appear to be as sensitive as those from any other available method.

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Cite This Study

Higgins et al. (1989) studied this question.

synapsesocial.com/papers/6a0deb46e51d8d6d0c09e1bfhttps://doi.org/10.1093/bioinformatics/5.2.151
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