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January 1, 1972Proceedings of the National Academy of Sciences192 citationsOpen Access

In Vitro Synthesis of DNA Complementary to Purified Rabbit Globin mRNA

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JRJeffrey RossHAHaim AvivESEdward M. Scolnick

Key Points

  • Determine whether viral RNA-dependent DNA polymerase can successfully transcribe purified rabbit globin mRNA into complementary DNA in vitro using an oligonucleotide primer.
  • Transcribed purified rabbit globin mRNA using viral RNA-dependent DNA polymerase in the presence of four deoxyribonucleoside triphosphates.
  • Evaluated primer specificity by testing oligo(dT), oligo(dG), oligo(dC), and oligo(dA) targeted to the 3'-terminal adenylic acid tail of the mRNA template.
  • Characterized product density and size using base treatment and alkaline sucrose gradient centrifugation alongside a 129,000 molecular weight DNA standard.
  • Reaction required the RNA template and all four dNTPs and was markedly stimulated by oligo(dT), whereas oligo(dG), oligo(dC), and oligo(dA) completely failed to prime DNA synthesis.
  • Synthesized product displayed an intermediate RNA-DNA density that shifted to single-stranded DNA density after alkaline treatment, confirming direct complementarity to globin mRNA.
  • The product sedimented slightly faster than a 129,000 molecular weight DNA marker in alkaline sucrose gradients, indicating a length of at least 500 bases, which is 50 bases longer than necessary to encode globin.

Abstract

Several properties of the viral RNA-dependent DNA polymerases and of rabbit globin mRNA make it possible to consider synthesis of the globin gene in vitro. These enzymes copy an RNA template using a short sequence of complementary nucleotides as a primer. Furthermore, globin mRNA has a 3'-terminal sequence of adenylic acid residues that make it particularly suitable as a template, since oligo(dT) can be annealed to a specific site on the mRNA. This small primer could phase the DNA polymerase, possibly ensuring that replication is initiated from that end of the globin message. We have used this approach and find that purified mRNA is an efficient template for the polymerase enzyme. The reaction requires the RNA template and the four deoxyribonucleoside triphosphates, and it is markedly stimulated by the addition of oligo(dT). Consistent with the expectation that the oligo(dT) uniquely phases the polymerase at an adenine-rich region in the globin message, oligo(dG), oligo(dC), and oligo(dA) fail to serve as primers. The product has a density intermediate between that of DNA and RNA, and shifts to a lighter DNA density after treatment with base. Further, it is specifically complementary to globin mRNA and sediments slightly faster in an alkaline sucrose gradient than a DNA standard that has a molecular weight of 129,000. The data suggest that a major portion of the DNA product is a sequence of at least 500 bases, about 50 more than would be necessary to encode rabbit globin. The potential usefulness of this interesting product is discussed.

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Cite This Study

Ross et al. (1972) studied this question.

synapsesocial.com/papers/6a11dd3a0aad52b339b4cd3dhttps://doi.org/10.1073/pnas.69.1.264
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