PulseExploreJournal ClubDebatesTrendingResearchersJournals
Instagram
HomeExploreJournal ClubTrending
Synapse
⌘+K
Synapse
May 26, 2026Biotechnology and Bioengineering0 citationsOpen Access

A Modular Nucleoside Kinase Cascade for the Synthesis of Ribonucleoside Triphosphates

View Full Paper
ODOliver T. DammMPMartin PfeifferJZJohannes Zöhrer

Key Points

  • The aim is to develop standardized, efficient methods for the synthesis of nucleoside 5′-triphosphates (NTPs).
  • One-pot enzymatic cascades were developed to produce all canonical NTPs (ATP, CTP, GTP, UTP).
  • Specific kinases from Saccharomyces cerevisiae and Escherichia coli were employed for phosphorylation.
  • Reactions were optimized for substrate conversion, reaching full conversion of ≥ 93% in defined timeframes.
  • Achieved 89% isolated yield of NTP in preparative-scale syntheses (10 mL).
  • Full conversion (≥ 93%) of substrate (50–100 mM) within 60–120 minutes was demonstrated.
  • A modified cascade reached ≥ 84% NTP conversion using the NTP as a phosphate shuttle.

Abstract

ABSTRACT The increasing demand for affordable nucleoside 5′‐triphosphates (NTPs) necessitates efficient and scalable methods of synthesis. Herein, we report standardized one‐pot enzymatic cascades for the production of all canonical NTPs (ATP, CTP, GTP, UTP). Central to these cascades is the Saccharomyces cerevisiae ( Saccharomyces cerevisiae UMP kinase ( Sc URA6), which efficiently phosphorylates AMP, CMP, and UMP. ScURA6 is inactive toward GMP, so Saccharomyces cerevisiae GMP kinase ( Sc GMPK) was used to synthesize GTP. NDPs were phosphorylated by Escherichia coli acetate kinase ( Ec AcK), using acetyl phosphate as the phosphate donor in the presence of catalytic amounts of ATP or GTP. Substrate‐specific kinases were used to phosphorylate the nucleoside starting material. The resulting four cascades were optimized for flux through each step to afford the NTP product in the absence of NMP and NDP intermediates. The reactions were intensified for full conversion (≥ 93%) of 50–100 mM substrate within 60–120 min. Alternatively, a modified cascade employing the product NTP as a phosphate shuttle was established, achieving an NTP conversion of ≥ 84%. Preparative‐scale syntheses (10 mL) reached up to 89% isolated yield (≥ 150 mg product), demonstrating a robust and scalable platform for NTP production. The kinases used are active with noncanonical nucleosides and nucleoside analogs, offering flexibility for broad synthetic applicability of the cascade transformations used.

Ask AI
Helpful
Bookmark
Share
View Full Paper

Cite This Study

Damm et al. (2026) studied this question.

synapsesocial.com/papers/6a153bdfb5d9c58d83e8d4abhttps://doi.org/10.1002/bit.70247
Ask AI
Helpful
Bookmark
Share
View Full Paper