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June 4, 2026CardioVascular and Interventional Radiology2 citationsOpen Access

A Promptable 3D-CT Foundation Model-Based Approach for Pulmonary Embolism

KFK. Le FlochEFE. FerreresJKJ. Khlaut

Key Points

  • This study aims to evaluate the efficiency of ClotIA, an AI-based model for rapid segmentation of blood clots in pulmonary embolism.
  • ClotIA was fine-tuned on a sample of 309 patients from the RSPECT dataset.
  • Segmentation performance was assessed using the Dice similarity coefficient and compared to nnUNet.
  • Correlation of predicted blood clot volume with imaging biomarkers of pulmonary embolism severity was conducted.
  • ClotIA achieved a mean Dice similarity coefficient of 0.83, significantly improved from 0.79 at baseline (p < 0.001).
  • The predicted blood clot volume correlated strongly with the reference volume (r = 0.995).
  • Significant correlation was found between predicted blood clot volume and RV/LV diameter ratio (r = 0.62, p < 0.001) and RV/LV volume ratio (r = 0.68, p < 0.001).

Abstract

Abstract Purpose Blood clot volume (BCV), defined as the total three-dimensional (3D) volume of the thrombus on computed tomography angiography (CTA), is an objective biomarker of pulmonary embolism (PE) severity whose clinical use is limited by time-consuming manual segmentation. This study evaluates ClotIA (Clot Interventional AI), a foundation model (FM)-based approach designed for rapid and interactive clot segmentation in PE. Materials and Methods RAPSv2, a foundation model derived from SAM2, was fine-tuned on a stratified sample of 309 patients from the RSPECT dataset (2020). Segmentation performance was evaluated using the Dice similarity coefficient (DSC) and compared to that of nnUNet (no-new-Net). The predicted BCV was correlated with imaging biomarkers of PE severity. Results ClotIA achieved a mean DSC of 0.83 ± 0.06 after guided refinement, compared to 0.79 ± 0.10 at baseline ( p < 0.001) and 0.81 ± 0.13 for nnUNet ( p < 0.001). The predicted BCV showed strong agreement with the reference volume (r = 0.995; mean bias + 0.12 mL) and was significantly correlated with RV/LV diameter ratio (r = 0.62, p < 0.001) and RV/LV volume ratio (r = 0.68, p < 0.001). Conclusion ClotIA enables rapid and reproducible 3D quantification of pulmonary embolism thrombi, correlating with established severity markers and providing the necessary basis for translating emerging biomarkers into clinical practice.

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Cite This Study

Floch et al. (2026) studied this question.

synapsesocial.com/papers/6a211670d499ed480b16f65dhttps://doi.org/10.1007/s00270-026-04488-2
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