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August 5, 2007Biometrika171 citations

Bayesian Nonparametric Estimation of the Probability of Discovering New Species

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ALAntonio LijoiRMRamsés H. MenaIPIgor Prünster

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Abstract

We consider the problem of evaluating the probability of discovering a certain number of new species in a new sample of population units, conditional on the number of species recorded in a basic sample. We use a Bayesian nonparametric approach. The different species proportions are assumed to be random and the observations from the population exchangeable. We provide a Bayesian estimator, under quadratic loss, for the probability of discovering new species which can be compared with well-known frequentist estimators. The results we obtain are illustrated through a numerical example and an application to a genomic dataset concerning the discovery of new genes by sequencing additional single-read sequences of cdna fragments.

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Lijoi et al. (2007) studied this question.

synapsesocial.com/papers/6a23d1e00f6fe640299f0a9fhttps://doi.org/10.1093/biomet/asm061
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