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March 17, 2024Nature Communications46 citationsOpen Access

Integrative genomic analyses identify candidate causal genes for calcific aortic valve stenosis involving tissue-specific regulation

STSébastien ThériaultStructural Heart DiseaseZLZhonglin LiInstitut Universitaire de Cardiologie et de Pneumologie de QuébecEAErik AbnerUniversity of Tartu

Key Result

A genome-wide association study meta-analysis identified 32 genomic loci, including 20 novel loci, significantly associated with calcific aortic valve stenosis.

Study Design

Type

Meta-Analysis (n=941,863)

Multicenter

Yes

Structured PICO

P
Population
941,863 participants of European ancestry, including 14,819 cases of calcific aortic valve stenosis and 927,044 controls, analyzed to identify genetic risk loci.
O
Outcome
Identification of genomic loci associated with calcific aortic valve stenosis (CAVS)surrogate

This large-scale GWAS meta-analysis identifies 20 novel genomic loci for calcific aortic valve stenosis and highlights candidate causal genes such as TWIST1, providing potential novel therapeutic targets.

Main Result

p-value: p=<5x10^-8

Limitations

  • Cohorts only included individuals of European ancestry, limiting generalizability to other populations.
  • Complementary evidence is needed to understand the biological mechanisms by which the identified genes impact CAVS risk.
  • Except for QUEBEC-CAVS-1, the cohorts included CAVS patients with a bicuspid aortic valve, which could partly mediate the risk for some loci.
  • The directionality and causal nature of the relationships identified in the cross-phenotype analyses remain to be determined.

Abstract

There is currently no medical therapy to prevent calcific aortic valve stenosis (CAVS). Multi-omics approaches could lead to the identification of novel molecular targets. Here, we perform a genome-wide association study (GWAS) meta-analysis including 14,819 cases among 941,863 participants of European ancestry. We report 32 genomic loci, among which 20 are novel. RNA sequencing of 500 human aortic valves highlights an enrichment in expression regulation at these loci and prioritizes candidate causal genes. Homozygous genotype for a risk variant near TWIST1, a gene involved in endothelial-mesenchymal transition, has a profound impact on aortic valve transcriptomics. We identify five genes outside of GWAS loci by combining a transcriptome-wide association study, colocalization, and Mendelian randomization analyses. Using cross-phenotype and phenome-wide approaches, we highlight the role of circulating lipoproteins, blood pressure and inflammation in the disease process. Our findings pave the way for the development of novel therapies for CAVS.

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Cite This Study

Thériault et al. (2024) conducted a meta-analysis in Calcific aortic valve stenosis (n=941,863). Genetic risk variants vs. Reference alleles was evaluated on Calcific aortic valve stenosis (p=<5x10^-8). A genome-wide association study meta-analysis identified 32 genomic loci, including 20 novel loci, significantly associated with calcific aortic valve stenosis.

synapsesocial.com/papers/6a86d666e925a1267eca01bfhttps://doi.org/10.1038/s41467-024-46639-4
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