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December 10, 2009PLoS Genetics172 citationsOpen Access

A Genome-Wide Association Study Reveals Variants in ARL15 that Influence Adiponectin Levels

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JRJ. Brent RichardsDWDawn WaterworthSOStephen O’Rahilly

Structured PICO

Are specific genetic variants associated with circulating adiponectin levels and risk of T2D and CHD?

P
Population
14,733 individuals from 8 cohorts (3 discovery GWAS n=8,531; 5 validation cohorts n=6,202) for adiponectin levels; 22,421 individuals for CHD risk analysis; 10,128 individuals for T2D risk analysis.
I
Intervention
Presence of single nucleotide polymorphisms (SNPs), specifically rs4311394-G in the ARL15 gene and rs266717 in the ADIPOQ locus
O
Outcome
Circulating adiponectin levelssurrogate

A novel genetic variant in ARL15 is associated with lower circulating adiponectin levels and an increased risk of coronary heart disease and type 2 diabetes.

Abstract

The adipocyte-derived protein adiponectin is highly heritable and inversely associated with risk of type 2 diabetes mellitus (T2D) and coronary heart disease (CHD). We meta-analyzed 3 genome-wide association studies for circulating adiponectin levels (n = 8,531) and sought validation of the lead single nucleotide polymorphisms (SNPs) in 5 additional cohorts (n = 6,202). Five SNPs were genome-wide significant in their relationship with adiponectin (P< or =5x10(-8)). We then tested whether these 5 SNPs were associated with risk of T2D and CHD using a Bonferroni-corrected threshold of P< or =0.011 to declare statistical significance for these disease associations. SNPs at the adiponectin-encoding ADIPOQ locus demonstrated the strongest associations with adiponectin levels (P-combined = 9.2x10(-19) for lead SNP, rs266717, n = 14,733). A novel variant in the ARL15 (ADP-ribosylation factor-like 15) gene was associated with lower circulating levels of adiponectin (rs4311394-G, P-combined = 2.9x10(-8), n = 14,733). This same risk allele at ARL15 was also associated with a higher risk of CHD (odds ratio OR = 1.12, P = 8.5x10(-6), n = 22,421) more nominally, an increased risk of T2D (OR = 1.11, P = 3.2x10(-3), n = 10,128), and several metabolic traits. Expression studies in humans indicated that ARL15 is well-expressed in skeletal muscle. These findings identify a novel protein, ARL15, which influences circulating adiponectin levels and may impact upon CHD risk.

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Cite This Study

Richards et al. (2009) studied this question.

synapsesocial.com/papers/6a8a9c1aaf6b08ee8d724579https://doi.org/10.1371/journal.pgen.1000768
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